PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00334_0090
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family E2F/DP
Protein Properties Length: 1081aa    MW: 112733 Da    PI: 9.4623
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00334_0090genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP72.54.6e-23227292171
        E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                    rkeksL+ll+ +f++++ +++ + v l+++a++L    v  +rRRiYDi+NVLe+++++ +k+kn+++w+g
  kfl00334_0090 227 RKEKSLGLLCDNFMSMYTSAQYEFVILDDAARKL---GV--ERRRIYDIVNVLESMQVVVRKAKNRYTWHG 292
                    79********************************...**..****************************98 PP

2E2F_TDP69.54.1e-22394473170
        E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwk 70 
                    r+eksL++ltq+f+ l+ +s++g+++l+++a+ L+s+     ++k+k+RR+YDi+N+L +++liek      +k+++rw+
  kfl00334_0090 394 RREKSLGVLTQRFVGLFLTSHTGVLSLDHAAEVLLSDcdataKTKTKVRRLYDIANILASMRLIEKiqvnkVRKPAFRWI 473
                    689***************************************************************99999999999997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.101.9E-25225294IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM013724.3E-26227292IPR003316E2F/DP family, winged-helix DNA-binding domain
PfamPF023192.6E-19228292IPR003316E2F/DP family, winged-helix DNA-binding domain
SuperFamilySSF467851.02E-13229293IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.101.5E-21391474IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM013721.0E-29394474IPR003316E2F/DP family, winged-helix DNA-binding domain
PfamPF023192.0E-18396473IPR003316E2F/DP family, winged-helix DNA-binding domain
SuperFamilySSF467852.54E-10396473IPR011991Winged helix-turn-helix DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0032876Biological Processnegative regulation of DNA endoreduplication
GO:0005634Cellular Componentnucleus
GO:0005667Cellular Componenttranscription factor complex
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1081 aa     Download sequence    Send to blast
MGSHAERSSQ DDFPLAFKCG RRRTSFPPPS QLDLPTLVTP KAATVAGAPA PKADATTTGS  60
QPGCDTWQSV EAPEPSIGNS LPVDEGSSQE HVESTQLEER PERTSLAAKR KTFSGGPAAD  120
CMSGPLEDQG HLEPFPPNGV KRLRVGHALQ LLDTNLPTLR PGSALSKANP SELPAASASE  180
GPAEVSADVS GRRGKGRKGG VPKVPVKEED GGESDSIAEE GGLAYCRKEK SLGLLCDNFM  240
SMYTSAQYEF VILDDAARKL GVERRRIYDI VNVLESMQVV VRKAKNRYTW HGLDNLPCAL  300
AQMKEDALRK EGGLAQASAI ASALSRERSM DLCEDILPAS QTDSFHGFPV SQPDSVPGSL  360
ASSRNTTPCN SDDEEADVRG PRGGKAKKSA GDSRREKSLG VLTQRFVGLF LTSHTGVLSL  420
DHAAEVLLSD CDATAKTKTK VRRLYDIANI LASMRLIEKI QVNKVRKPAF RWICANSRIA  480
LNSRADNLKW CVPLLRPEEL AAGGSKRPAD DPPSVEPAEN ELPAKRLRTG LQRVNEEGVG  540
APGAFEWVRS LTGSGRGIAP GQMPDRPVAV YPSTQWPIAI AHVAGGKHPG EGPQVPFGGS  600
ENGWREWGGE RIGAGYGGVL GPPGPVGSGE QGARKAGQAL LRQVSAPVAV KIETDRPMTG  660
PVLKASGSWP VLGGFPSTEF FGLPLTGGPL ARSATPPLQT TSPEAPINTG PVEGLRSSHE  720
ESLQRSPVTK CAMTGANPPQ IHSLTDPETG ARSPSPSPSP TEGSPPTTLR CEKAPARKLR  780
HILPRTPATS AHAAATSSPG LAIPSADTWL TPNAKPLPDT PLFAGLFGGQ CENPSGVNAV  840
NPAYVQYMAA CHALYQQFAA PVHTLPAAAP VHTAAPVHTQ APNYAAVPNY ASVPVHTPSS  900
YATSPLGAAR SGGVNSFPAP VVSPNRAAAA TNQFGMHSLQ GPVLPGVAVP SPMNARLLTP  960
PAQKQGPGRA IPALQARGPM PPGLVLLPGT ARPAKTSPNQ GPVGVPRAEQ AFPFGASLEH  1020
NTGALGPGNF GPPGQKRVAV VQQGPANGPS VGRRLTAGIT ALGGTRPGSA KRGGSPPGGK  1080
R
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4yo2_A3e-392274684232Transcription factor E2F8
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00397DAPTransfer from AT3G48160Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP24741634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.17e-56DP-E2F-like 1